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CPAN Miscellaneous Modules Bio Modules

Bio::ASN1::EntrezGene - Regular expression-based Perl Parser for NCBI Entrez Gene.

Bio:Affymetrix

Bio:Chaos

Bio:ConnectDots

Bio::DOOP::DOOP - DOOP API main module

Bio::Das::Lite - Perl extension for the DAS

Bio:Das:ProServer

Bio::Das - Interface to Distributed Annotation System

Bio::ECell - Perl interface for E-Cell Simulation Environment.

Bio::Emboss - Write EMBOSS programs in Perl

Bio::ExtractNE - Extract biological named entities from PUBMED abstracts

CGI::FormBuilder::Source::File - Initialize FormBuilder from external file

Bio::FASTASequence - Perl extension for Bioinformatics. Parsing sequence informations.

Bio::FastaStream - Perl extension for Bioinformatics. Parsing sequence informations.

Bio::GMOD - Unified API for Model Organism Databases

Bio:Genex

Bio:MAGE:Utils

Bio::MAGE - Container module for classes in the MAGE package: MAGE

Bio:MCPrimers

Bio::Maxd - Perl extension for storing and retrieving data from maxd

Bio::MedChunker - NP chunker for MEDLINE texts

Bio::Medpost - Part of speech tagger for MEDLINE text

Bio::Metabolic - Perl extension for representing and simulating metabolic networks

Bio::NEXUS - An object-oriented Perl Applications Programming Interface for the NEXUS file format

Bio::Phylo - Phylogenetic analysis using perl.

Bio::PrimerDesigner - Design PCR Primers using primer3 and epcr

Bio:Prospect

Bio::SAGE::Comparison - Compares data from serial analysis of gene expression libraries.

Bio::SAGE::DataProcessing - Processes raw serial analysis of gene expression data.

Bio::SCF - Perl extension for reading and writting SCF sequence files

Bio::Tools::DNAGen - Generating a pool of DNA sequences

Bio::Tools::Prepeat - Finding repeats in protein sequences

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