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Bio::DB::SQL::SeqLocationAdaptor
An adaptor for retrieving sequence locations for a db.

Bio::DB::SQL::SeqLocationAdaptor - An adaptor for retrieving sequence locations for a db.


NAME

Bio::DB::SQL::SeqLocationAdaptor - An adaptor for retrieving sequence locations for a db.


SYNOPSIS

Give standard usage here


DESCRIPTION

Describe the object here


FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to one of the Bioperl mailing lists. Your participation is much appreciated.


  bioperl-l@bio.perl.org

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution. Bug reports can be submitted via email or the web:


  bioperl-bugs@bio.perl.org

  http://bio.perl.org/bioperl-bugs/


AUTHOR - Ewan Birney

Email birney@ebi.ac.uk

Describe contact details here


APPENDIX

The rest of the documentation details each of the object methods. Internal methods are usually preceded with a _

fetch_by_dbID


 Title   : fetch_by_dbID

 Usage   :

 Function:

 Example :

 Returns : 

 Args    :

store


 Title   : store

 Usage   :

 Function:

 Example :

 Returns : 

 Args    :

_store_component


 Title   : _store_component

 Usage   :

 Function:

 Example :

 Returns : 

 Args    :

remove_by_dbID


 Title   : remove_by_dbID

 Usage   :

 Function:

 Example :

 Returns : 

 Args    :

_clean_orphans


 Title   : _clean_orphans

 Usage   : 

 Function: Checks the remote_seqfeature_name table for entries that are not linked to any record in seqfeature_location and deletes such entries. 

 Example :

 Returns : number of records deleted

 Args    : none
Programminig
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Wy
yW
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Programming
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